Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 AC083880.1-201ENST00000608266 535 ntBASIC18.64■□□□□ 0.57
RNF6Q9Y252 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 AL162412.1-201ENST00000567129 965 ntBASIC18.63■□□□□ 0.57
RNF6Q9Y252 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 MYC-209ENST00000641252 345 ntBASIC18.63■□□□□ 0.57
RNF6Q9Y252 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 AC010980.2-201ENST00000587099 1412 ntBASIC18.63■□□□□ 0.57
RNF6Q9Y252 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF6Q9Y252 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF6Q9Y252 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 PRORSD1P-201ENST00000295112 541 ntBASIC18.62■□□□□ 0.57
RNF6Q9Y252 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF6Q9Y252 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RNF6Q9Y252 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF6Q9Y252 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF6Q9Y252 AC061975.6-201ENST00000579045 1553 ntBASIC18.61■□□□□ 0.57
RNF6Q9Y252 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF6Q9Y252 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF6Q9Y252 AC243732.1-201ENST00000612648 864 ntBASIC18.61■□□□□ 0.57
RNF6Q9Y252 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF6Q9Y252 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.61■□□□□ 0.57
RNF6Q9Y252 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF6Q9Y252 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RNF6Q9Y252 AC091874.3-201ENST00000512672 1195 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms