Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBQLN2Q9UHD9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN2Q9UHD9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN2Q9UHD9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 UNC93B3-201ENST00000308076 687 ntBASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 AC012313.1-201ENST00000593393 3059 ntBASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 AC104581.1-202ENST00000635932 2618 ntBASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 SYT6-210ENST00000641643 1587 ntBASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN2Q9UHD9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN2Q9UHD9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.71■□□□□ 0.26
UBQLN2Q9UHD9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN2Q9UHD9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
UBQLN2Q9UHD9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN2Q9UHD9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AC009113.1-201ENST00000570267 2443 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AC092171.4-201ENST00000609130 632 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AC241377.3-202ENST00000626088 1088 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AC241585.3-202ENST00000628937 1088 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 AC245100.8-202ENST00000629247 1058 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 PRORSD1P-202ENST00000563365 2154 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 HTR7P1-202ENST00000624664 4411 ntBASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms