Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
RIMBP3Q9UFD9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC31.88■■■□□ 2.69
RIMBP3Q9UFD9 AC016734.2-201ENST00000624325 1377 ntBASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 AP000523.1-201ENST00000398242 1049 ntBASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC31.87■■■□□ 2.69
RIMBP3Q9UFD9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 FGF14-AS2-201ENST00000606448 1074 ntBASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 AL590627.1-203ENST00000421194 1026 ntBASIC31.86■■■□□ 2.69
RIMBP3Q9UFD9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 SLC25A1P1-201ENST00000528351 927 ntBASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RIMBP3Q9UFD9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.84■■■□□ 2.69
RIMBP3Q9UFD9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 AP003041.3-201ENST00000527151 707 ntBASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RIMBP3Q9UFD9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
RIMBP3Q9UFD9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.69
RIMBP3Q9UFD9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
RIMBP3Q9UFD9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.69
RIMBP3Q9UFD9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 BX119927.1-201ENST00000636596 1552 ntBASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC31.82■■■□□ 2.68
RIMBP3Q9UFD9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 PMS2P2-201ENST00000425039 1128 ntBASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms