Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 EEF1DP3-203ENST00000566025 782 ntBASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 AC011298.3-201ENST00000615796 283 ntBASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 AC133561.4-201ENST00000566112 224 ntBASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 RARRES2P11-201ENST00000635158 484 ntBASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD3Q9UBI1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 AC104581.1-202ENST00000635932 2618 ntBASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 DUX4L19-201ENST00000557448 1267 ntBASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 MIR3621-201ENST00000580529 85 ntBASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 HTR7P1-202ENST00000624664 4411 ntBASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD3Q9UBI1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
COMMD3Q9UBI1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 AC116050.2-201ENST00000612102 1779 ntBASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COMMD3Q9UBI1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms