Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 KRT16P6-202ENST00000425692 1426 ntBASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 AC068338.2-201ENST00000563278 1430 ntBASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 DUX4L16-201ENST00000555130 1264 ntBASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 AC231657.2-201ENST00000624556 255 ntBASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 AL691432.2-201ENST00000607222 2038 ntBASIC16.65■□□□□ 0.26
KCNIP1Q9NZI2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 KRT8P17-201ENST00000453110 1448 ntBASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 AC007322.1-201ENST00000426983 750 ntBASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNIP1Q9NZI2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 RARRES2P6-201ENST00000567333 442 ntBASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 AC105020.6-201ENST00000621523 1217 ntBASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP1Q9NZI2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 HLA-G-202ENST00000376815 851 ntBASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 HLA-G-203ENST00000376818 1127 ntBASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 CNN2P6-201ENST00000439038 900 ntBASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 MIR5787-201ENST00000611784 55 ntBASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KCNIP1Q9NZI2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms