Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.19■□□□□ 0.98
CISHQ9NSE2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CISHQ9NSE2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 ESRRAP1-201ENST00000400596 1257 ntBASIC21.18■□□□□ 0.98
CISHQ9NSE2 POM121L13P-201ENST00000422362 380 ntBASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC018553.1-201ENST00000616682 1458 ntBASIC21.18■□□□□ 0.98
CISHQ9NSE2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 AC116351.2-201ENST00000606540 1585 ntBASIC21.18■□□□□ 0.98
CISHQ9NSE2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CISHQ9NSE2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CISHQ9NSE2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CISHQ9NSE2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CISHQ9NSE2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CISHQ9NSE2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CISHQ9NSE2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CISHQ9NSE2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CISHQ9NSE2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 TMEM179-206ENST00000616017 1645 ntBASIC21.16■□□□□ 0.98
CISHQ9NSE2 AC009237.14-201ENST00000609975 1594 ntBASIC21.16■□□□□ 0.98
CISHQ9NSE2 AP001271.2-201ENST00000624018 1556 ntBASIC21.16■□□□□ 0.98
CISHQ9NSE2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CISHQ9NSE2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CISHQ9NSE2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CISHQ9NSE2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CISHQ9NSE2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CISHQ9NSE2 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms