Protein–RNA interactions for Protein: Q9NQT6

FSCN3, Fascin-3, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN3Q9NQT6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FSCN3Q9NQT6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
FSCN3Q9NQT6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 AC026271.3-201ENST00000571884 352 ntBASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 AC139887.4-201ENST00000607877 719 ntBASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FSCN3Q9NQT6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 AC063952.2-201ENST00000498792 1227 ntBASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.4■□□□□ 0.7
FSCN3Q9NQT6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
FSCN3Q9NQT6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
FSCN3Q9NQT6 PLK5-205ENST00000642079 1969 ntBASIC19.39■□□□□ 0.7
FSCN3Q9NQT6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 BX664615.1-201ENST00000443558 458 ntBASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 AC008040.2-201ENST00000461049 708 ntBASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 DGCR10-201ENST00000609839 495 ntBASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FSCN3Q9NQT6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 DPP3P2-201ENST00000416030 1696 ntBASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 AC128688.1-201ENST00000487626 519 ntBASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FSCN3Q9NQT6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FSCN3Q9NQT6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms