Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RPS2P4-201ENST00000476944 856 ntBASIC20.78■□□□□ 0.92
CD248Q9HCU0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 AC233263.1-201ENST00000578059 224 ntBASIC20.78■□□□□ 0.92
CD248Q9HCU0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CD248Q9HCU0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD248Q9HCU0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD248Q9HCU0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD248Q9HCU0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD248Q9HCU0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CD248Q9HCU0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD248Q9HCU0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 AC008550.1-201ENST00000511500 884 ntBASIC20.75■□□□□ 0.91
CD248Q9HCU0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD248Q9HCU0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.75■□□□□ 0.91
CD248Q9HCU0 BX323043.1-201ENST00000641006 1765 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms