Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 AL135905.2-201ENST00000584934 1404 ntBASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.58■□□□□ 0.72
POLR1BQ9H9Y6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 AC124016.1-201ENST00000609552 612 ntBASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 AL049637.2-201ENST00000641778 930 ntBASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR1BQ9H9Y6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AL020996.1-203ENST00000536896 2307 ntBASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AC239809.2-201ENST00000415381 517 ntBASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AL023875.1-201ENST00000640777 796 ntBASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR1BQ9H9Y6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 MIR4785-201ENST00000585005 73 ntBASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 AC026471.6-201ENST00000622954 1905 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms