Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.14■□□□□ 0.82
LRRC40Q9H9A6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 NCF1B-203ENST00000435988 1254 ntBASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 AC092118.2-201ENST00000613495 667 ntBASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC40Q9H9A6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 AL158211.5-201ENST00000623583 2518 ntBASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 PHGDH-210ENST00000641115 1638 ntBASIC20.13■□□□□ 0.81
LRRC40Q9H9A6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 GUSBP6-202ENST00000438529 1198 ntBASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 TSPY6P-201ENST00000448518 926 ntBASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC40Q9H9A6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.11■□□□□ 0.81
LRRC40Q9H9A6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.1■□□□□ 0.81
LRRC40Q9H9A6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms