Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 SLC47A1P1-202ENST00000449666 945 ntBASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 AL033527.3-201ENST00000566366 1196 ntBASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 AC079598.2-202ENST00000546624 1451 ntBASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.48□□□□□ -0.09
MAP1LC3AQ9H492 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 AL138724.1-201ENST00000606771 1088 ntBASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MAP1LC3AQ9H492 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 AC239859.2-201ENST00000444165 318 ntBASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.46□□□□□ -0.09
MAP1LC3AQ9H492 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MAP1LC3AQ9H492 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MAP1LC3AQ9H492 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms