Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 INGX-201ENST00000359239 846 ntBASIC21.75■■□□□ 1.07
HIPK3Q9H422 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIPK3Q9H422 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HIPK3Q9H422 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK3Q9H422 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK3Q9H422 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 AC131212.4-201ENST00000623606 975 ntBASIC21.74■■□□□ 1.07
HIPK3Q9H422 Z98882.1-201ENST00000622160 2253 ntBASIC21.74■■□□□ 1.07
HIPK3Q9H422 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
HIPK3Q9H422 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK3Q9H422 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIPK3Q9H422 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIPK3Q9H422 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.73■■□□□ 1.07
HIPK3Q9H422 AL117328.2-201ENST00000624617 1940 ntBASIC21.72■■□□□ 1.07
HIPK3Q9H422 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 AC117947.1-201ENST00000427448 529 ntBASIC21.72■■□□□ 1.07
HIPK3Q9H422 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 SLC25A1P4-201ENST00000567977 778 ntBASIC21.72■■□□□ 1.07
HIPK3Q9H422 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIPK3Q9H422 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.72■■□□□ 1.07
HIPK3Q9H422 AL049796.1-201ENST00000565336 1766 ntBASIC21.71■■□□□ 1.07
HIPK3Q9H422 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 YBX1P10-201ENST00000444752 975 ntBASIC21.71■■□□□ 1.07
HIPK3Q9H422 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.71■■□□□ 1.07
HIPK3Q9H422 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIPK3Q9H422 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms