Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 LINC02228-204ENST00000642115 2962 ntBASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 LINC02199-201ENST00000506655 2702 ntBASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CYSTM1Q9H1C7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 AC008764.6-201ENST00000595909 2069 ntBASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms