Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX47Q9H0S4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX47Q9H0S4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX47Q9H0S4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 KRT8P17-201ENST00000453110 1448 ntBASIC20.62■□□□□ 0.89
DDX47Q9H0S4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 MYCNOS-205ENST00000641950 531 ntBASIC20.62■□□□□ 0.89
DDX47Q9H0S4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX47Q9H0S4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms