Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 KRASP1-201ENST00000407852 552 ntBASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 RARRES2P10-201ENST00000564312 460 ntBASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 AC006557.6-201ENST00000623071 864 ntBASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 AC099778.1-201ENST00000568593 1911 ntBASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 AL390719.1-204ENST00000412397 1219 ntBASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RPAP1Q9BWH6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.14■■□□□ 1.46
RPAP1Q9BWH6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RPAP1Q9BWH6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
RPAP1Q9BWH6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.14■■□□□ 1.46
RPAP1Q9BWH6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 ECEL1P3-201ENST00000427961 737 ntBASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 TSPY7P-201ENST00000431358 1114 ntBASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 AP001412.1-201ENST00000608405 714 ntBASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPAP1Q9BWH6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 LINC01023-201ENST00000606054 436 ntBASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 AC113410.3-201ENST00000623366 203 ntBASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.13■■□□□ 1.45
RPAP1Q9BWH6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 AC023632.3-201ENST00000521633 145 ntBASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 AFG3L1P-217ENST00000557444 2447 ntBASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 MIR4785-201ENST00000585005 73 ntBASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.12■■□□□ 1.45
RPAP1Q9BWH6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 KRT17P2-201ENST00000300992 1314 ntBASIC24.11■■□□□ 1.45
RPAP1Q9BWH6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms