Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 AP005212.1-201ENST00000581547 1997 ntBASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 AL020996.1-203ENST00000536896 2307 ntBASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 AC087289.5-201ENST00000586076 3175 ntBASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 AL390719.1-204ENST00000412397 1219 ntBASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCGF1Q9BSM1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCGF1Q9BSM1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 KRT17P3-201ENST00000420566 1262 ntBASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AC073648.6-201ENST00000641589 218 ntBASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 KRT8P36-201ENST00000489121 1440 ntBASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.58■□□□□ 0.24
PCGF1Q9BSM1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms