Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.45■□□□□ 0.38
VRK1Q99986 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VRK1Q99986 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VRK1Q99986 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK1Q99986 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.44■□□□□ 0.38
VRK1Q99986 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK1Q99986 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VRK1Q99986 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 AC006058.3-201ENST00000606217 1069 ntBASIC17.44■□□□□ 0.38
VRK1Q99986 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.44■□□□□ 0.38
VRK1Q99986 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.44■□□□□ 0.38
VRK1Q99986 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK1Q99986 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
VRK1Q99986 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK1Q99986 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 AC006128.1-201ENST00000624704 1661 ntBASIC17.43■□□□□ 0.38
VRK1Q99986 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.43■□□□□ 0.38
VRK1Q99986 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK1Q99986 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK1Q99986 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK1Q99986 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK1Q99986 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK1Q99986 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 PGM5P4-201ENST00000421970 445 ntBASIC17.42■□□□□ 0.38
VRK1Q99986 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK1Q99986 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.42■□□□□ 0.38
VRK1Q99986 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.42■□□□□ 0.38
VRK1Q99986 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.42■□□□□ 0.38
VRK1Q99986 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VRK1Q99986 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 AC105020.6-201ENST00000621523 1217 ntBASIC17.42■□□□□ 0.38
VRK1Q99986 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK1Q99986 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms