Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.75■□□□□ 0.91
CDCA3Q99618 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.75■□□□□ 0.91
CDCA3Q99618 TSPY5P-201ENST00000426936 936 ntBASIC20.75■□□□□ 0.91
CDCA3Q99618 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 MFAP1P1-201ENST00000442257 1255 ntBASIC20.75■□□□□ 0.91
CDCA3Q99618 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.75■□□□□ 0.91
CDCA3Q99618 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 AC139887.4-201ENST00000607877 719 ntBASIC20.75■□□□□ 0.91
CDCA3Q99618 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDCA3Q99618 AC018553.1-201ENST00000616682 1458 ntBASIC20.75■□□□□ 0.91
CDCA3Q99618 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.74■□□□□ 0.91
CDCA3Q99618 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA3Q99618 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA3Q99618 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA3Q99618 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDCA3Q99618 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CDCA3Q99618 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDCA3Q99618 FAM207BP-201ENST00000447172 505 ntBASIC20.74■□□□□ 0.91
CDCA3Q99618 AC092647.4-201ENST00000457211 535 ntBASIC20.74■□□□□ 0.91
CDCA3Q99618 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA3Q99618 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA3Q99618 COX11P1-201ENST00000489116 835 ntBASIC20.74■□□□□ 0.91
CDCA3Q99618 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.74■□□□□ 0.91
CDCA3Q99618 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA3Q99618 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CDCA3Q99618 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA3Q99618 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA3Q99618 AP000550.4-202ENST00000639755 178 ntBASIC20.74■□□□□ 0.91
CDCA3Q99618 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDCA3Q99618 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA3Q99618 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDCA3Q99618 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CDCA3Q99618 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA3Q99618 YBX1P2-201ENST00000489612 999 ntBASIC20.73■□□□□ 0.91
CDCA3Q99618 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA3Q99618 AL512604.3-201ENST00000569583 964 ntBASIC20.73■□□□□ 0.91
CDCA3Q99618 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CDCA3Q99618 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA3Q99618 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDCA3Q99618 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CDCA3Q99618 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA3Q99618 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
CDCA3Q99618 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA3Q99618 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA3Q99618 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA3Q99618 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA3Q99618 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDCA3Q99618 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDCA3Q99618 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA3Q99618 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CDCA3Q99618 AC009947.2-201ENST00000444014 672 ntBASIC20.71■□□□□ 0.91
CDCA3Q99618 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDCA3Q99618 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.71■□□□□ 0.91
CDCA3Q99618 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDCA3Q99618 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA3Q99618 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA3Q99618 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 AL031432.5-201ENST00000641059 760 ntBASIC20.71■□□□□ 0.91
CDCA3Q99618 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA3Q99618 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDCA3Q99618 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDCA3Q99618 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA3Q99618 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDCA3Q99618 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDCA3Q99618 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA3Q99618 AC008040.2-201ENST00000461049 708 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms