Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 ESRRAP1-201ENST00000400596 1257 ntBASIC16.63■□□□□ 0.25
CCL13Q99616 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL13Q99616 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.63■□□□□ 0.25
CCL13Q99616 AP003097.1-201ENST00000530657 1135 ntBASIC16.63■□□□□ 0.25
CCL13Q99616 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL13Q99616 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL13Q99616 AC008687.6-201ENST00000596318 630 ntBASIC16.63■□□□□ 0.25
CCL13Q99616 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL13Q99616 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCL13Q99616 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCL13Q99616 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCL13Q99616 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL13Q99616 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL13Q99616 AC124283.5-201ENST00000624661 1809 ntBASIC16.62■□□□□ 0.25
CCL13Q99616 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
CCL13Q99616 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 RPS2P52-201ENST00000469610 820 ntBASIC16.62■□□□□ 0.25
CCL13Q99616 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCL13Q99616 AC026366.1-201ENST00000488803 879 ntBASIC16.62■□□□□ 0.25
CCL13Q99616 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL13Q99616 AC008403.3-201ENST00000598924 454 ntBASIC16.62■□□□□ 0.25
CCL13Q99616 AC120498.8-201ENST00000614275 531 ntBASIC16.62■□□□□ 0.25
CCL13Q99616 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL13Q99616 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL13Q99616 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCL13Q99616 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCL13Q99616 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 TSPY20P-201ENST00000450910 630 ntBASIC16.61■□□□□ 0.25
CCL13Q99616 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.61■□□□□ 0.25
CCL13Q99616 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.61■□□□□ 0.25
CCL13Q99616 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL13Q99616 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CCL13Q99616 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL13Q99616 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 AL691432.2-201ENST00000607222 2038 ntBASIC16.6■□□□□ 0.25
CCL13Q99616 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 AC073130.3-201ENST00000624389 2278 ntBASIC16.6■□□□□ 0.25
CCL13Q99616 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL13Q99616 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL13Q99616 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.6■□□□□ 0.25
CCL13Q99616 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL13Q99616 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL13Q99616 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCL13Q99616 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms