Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 AL845331.1-201ENST00000424978 1190 ntBASIC20.09■□□□□ 0.81
PHOX2BQ99453 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 AL138966.2-201ENST00000621997 464 ntBASIC20.09■□□□□ 0.81
PHOX2BQ99453 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PHOX2BQ99453 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 KRT8P10-201ENST00000450021 1447 ntBASIC20.09■□□□□ 0.81
PHOX2BQ99453 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHOX2BQ99453 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHOX2BQ99453 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHOX2BQ99453 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.08■□□□□ 0.81
PHOX2BQ99453 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHOX2BQ99453 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHOX2BQ99453 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.08■□□□□ 0.81
PHOX2BQ99453 KSR1P1-201ENST00000446298 240 ntBASIC20.08■□□□□ 0.81
PHOX2BQ99453 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
PHOX2BQ99453 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.08■□□□□ 0.81
PHOX2BQ99453 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHOX2BQ99453 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHOX2BQ99453 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHOX2BQ99453 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHOX2BQ99453 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHOX2BQ99453 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHOX2BQ99453 AL022342.1-201ENST00000400363 863 ntBASIC20.07■□□□□ 0.8
PHOX2BQ99453 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 AL137060.1-201ENST00000618151 2648 ntBASIC20.07■□□□□ 0.8
PHOX2BQ99453 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.07■□□□□ 0.8
PHOX2BQ99453 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHOX2BQ99453 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHOX2BQ99453 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 MESTP1-201ENST00000404287 994 ntBASIC20.06■□□□□ 0.8
PHOX2BQ99453 NIFKP9-201ENST00000419265 221 ntBASIC20.06■□□□□ 0.8
PHOX2BQ99453 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 AC004264.1-201ENST00000608354 794 ntBASIC20.06■□□□□ 0.8
PHOX2BQ99453 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
PHOX2BQ99453 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHOX2BQ99453 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 KRT8P45-201ENST00000414328 1447 ntBASIC20.05■□□□□ 0.8
PHOX2BQ99453 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.05■□□□□ 0.8
PHOX2BQ99453 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.05■□□□□ 0.8
PHOX2BQ99453 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHOX2BQ99453 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 PGM5P4-201ENST00000421970 445 ntBASIC20.04■□□□□ 0.8
PHOX2BQ99453 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.04■□□□□ 0.8
PHOX2BQ99453 AC139530.3-201ENST00000620344 690 ntBASIC20.04■□□□□ 0.8
PHOX2BQ99453 AC011558.1-201ENST00000623459 338 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms