Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.42■□□□□ 0.06
DUX3Q96PT4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DUX3Q96PT4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 MIR718-201ENST00000390190 70 ntBASIC15.41■□□□□ 0.06
DUX3Q96PT4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 SNORA78-201ENST00000459373 127 ntBASIC15.41■□□□□ 0.06
DUX3Q96PT4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 AC023632.3-201ENST00000521633 145 ntBASIC15.41■□□□□ 0.06
DUX3Q96PT4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DUX3Q96PT4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DUX3Q96PT4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 PRKY-204ENST00000533551 1019 ntBASIC15.4■□□□□ 0.06
DUX3Q96PT4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.4■□□□□ 0.06
DUX3Q96PT4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DUX3Q96PT4 PTBP1P-201ENST00000554374 1601 ntBASIC15.39■□□□□ 0.05
DUX3Q96PT4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DUX3Q96PT4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
DUX3Q96PT4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
DUX3Q96PT4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.39■□□□□ 0.05
DUX3Q96PT4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DUX3Q96PT4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DUX3Q96PT4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
DUX3Q96PT4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms