Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.88■□□□□ 0.29
SPG11Q96JI7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPG11Q96JI7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC092647.4-201ENST00000457211 535 ntBASIC16.87■□□□□ 0.29
SPG11Q96JI7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC004263.2-201ENST00000617183 678 ntBASIC16.87■□□□□ 0.29
SPG11Q96JI7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.87■□□□□ 0.29
SPG11Q96JI7 TSPY5P-201ENST00000426936 936 ntBASIC16.87■□□□□ 0.29
SPG11Q96JI7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SPG11Q96JI7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPG11Q96JI7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.86■□□□□ 0.29
SPG11Q96JI7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 AC130371.2-201ENST00000619443 611 ntBASIC16.85■□□□□ 0.29
SPG11Q96JI7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SPG11Q96JI7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPG11Q96JI7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 AL121603.2-201ENST00000557373 2117 ntBASIC16.84■□□□□ 0.29
SPG11Q96JI7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms