Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
VCPIP1Q96JH7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 AL390719.1-204ENST00000412397 1219 ntBASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCPIP1Q96JH7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCPIP1Q96JH7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
VCPIP1Q96JH7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
VCPIP1Q96JH7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.89■□□□□ 0.94
VCPIP1Q96JH7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VCPIP1Q96JH7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 AC116351.2-201ENST00000606540 1585 ntBASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.89■□□□□ 0.93
VCPIP1Q96JH7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 MYC-209ENST00000641252 345 ntBASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VCPIP1Q96JH7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms