Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS50Q96JG6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS50Q96JG6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS50Q96JG6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS50Q96JG6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS50Q96JG6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS50Q96JG6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VPS50Q96JG6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 AC091874.3-201ENST00000512672 1195 ntBASIC19.34■□□□□ 0.69
VPS50Q96JG6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS50Q96JG6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS50Q96JG6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VPS50Q96JG6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS50Q96JG6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VPS50Q96JG6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VPS50Q96JG6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VPS50Q96JG6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS50Q96JG6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS50Q96JG6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS50Q96JG6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
VPS50Q96JG6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS50Q96JG6 TSPY20P-201ENST00000450910 630 ntBASIC19.33■□□□□ 0.68
VPS50Q96JG6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.33■□□□□ 0.68
VPS50Q96JG6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS50Q96JG6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS50Q96JG6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.33■□□□□ 0.68
VPS50Q96JG6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS50Q96JG6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS50Q96JG6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VPS50Q96JG6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS50Q96JG6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
VPS50Q96JG6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS50Q96JG6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 DUSP5P2-201ENST00000426873 1033 ntBASIC19.32■□□□□ 0.68
VPS50Q96JG6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VPS50Q96JG6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.32■□□□□ 0.68
VPS50Q96JG6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS50Q96JG6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 AC098934.4-201ENST00000564127 592 ntBASIC19.31■□□□□ 0.68
VPS50Q96JG6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
VPS50Q96JG6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 MYC-209ENST00000641252 345 ntBASIC19.31■□□□□ 0.68
VPS50Q96JG6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 SMG8-203ENST00000578922 2178 ntBASIC19.31■□□□□ 0.68
VPS50Q96JG6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VPS50Q96JG6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS50Q96JG6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms