Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 AC011558.1-201ENST00000623459 338 ntBASIC23.36■■□□□ 1.33
CDCA5Q96FF9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 IER3-202ENST00000376377 1350 ntBASIC23.36■■□□□ 1.33
CDCA5Q96FF9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 AC007663.1-201ENST00000438948 1240 ntBASIC23.35■■□□□ 1.33
CDCA5Q96FF9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 AC141257.4-201ENST00000634557 245 ntBASIC23.35■■□□□ 1.33
CDCA5Q96FF9 AC136944.6-201ENST00000634818 245 ntBASIC23.35■■□□□ 1.33
CDCA5Q96FF9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 AC121338.2-201ENST00000622535 1744 ntBASIC23.35■■□□□ 1.33
CDCA5Q96FF9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 TFP1-202ENST00000475455 1573 ntBASIC23.35■■□□□ 1.33
CDCA5Q96FF9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.35■■□□□ 1.33
CDCA5Q96FF9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 SLC25A1P2-201ENST00000430693 912 ntBASIC23.34■■□□□ 1.33
CDCA5Q96FF9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 AC096733.2-201ENST00000609937 1394 ntBASIC23.34■■□□□ 1.33
CDCA5Q96FF9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDCA5Q96FF9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC004951.3-201ENST00000418645 1148 ntBASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AL450487.1-201ENST00000426799 995 ntBASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 AC010653.2-201ENST00000623505 997 ntBASIC23.33■■□□□ 1.33
CDCA5Q96FF9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDCA5Q96FF9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDCA5Q96FF9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CDCA5Q96FF9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.32■■□□□ 1.32
CDCA5Q96FF9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
CDCA5Q96FF9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms