Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AL355075.4-201ENST00000554988 638 ntBASIC21.54■■□□□ 1.04
PGBD4Q96DM1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 AL353708.3-201ENST00000610272 989 ntBASIC21.54■■□□□ 1.04
PGBD4Q96DM1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.54■■□□□ 1.04
PGBD4Q96DM1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 FAM197Y1-201ENST00000421178 764 ntBASIC21.53■■□□□ 1.04
PGBD4Q96DM1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 AP003071.4-201ENST00000562276 1284 ntBASIC21.53■■□□□ 1.04
PGBD4Q96DM1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD4Q96DM1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD4Q96DM1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.52■■□□□ 1.03
PGBD4Q96DM1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.52■■□□□ 1.03
PGBD4Q96DM1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PGBD4Q96DM1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.52■■□□□ 1.03
PGBD4Q96DM1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
PGBD4Q96DM1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 AP006587.1-201ENST00000534129 1502 ntBASIC21.5■■□□□ 1.03
PGBD4Q96DM1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 TSPY15P-201ENST00000457163 923 ntBASIC21.5■■□□□ 1.03
PGBD4Q96DM1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.5■■□□□ 1.03
PGBD4Q96DM1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms