Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 AC098934.4-201ENST00000564127 592 ntBASIC20.42■□□□□ 0.86
HDAC11Q96DB2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
HDAC11Q96DB2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.42■□□□□ 0.86
HDAC11Q96DB2 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.42■□□□□ 0.86
HDAC11Q96DB2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 AC097658.1-201ENST00000475555 843 ntBASIC20.41■□□□□ 0.86
HDAC11Q96DB2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 TMEM179-206ENST00000616017 1645 ntBASIC20.41■□□□□ 0.86
HDAC11Q96DB2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDAC11Q96DB2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 AC069152.1-201ENST00000438030 544 ntBASIC20.4■□□□□ 0.86
HDAC11Q96DB2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.4■□□□□ 0.86
HDAC11Q96DB2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDAC11Q96DB2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 AC005829.2-201ENST00000571422 1056 ntBASIC20.39■□□□□ 0.85
HDAC11Q96DB2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 AC133041.1-202ENST00000642053 222 ntBASIC20.39■□□□□ 0.85
HDAC11Q96DB2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC11Q96DB2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 HLA-L-209ENST00000420110 1011 ntBASIC20.38■□□□□ 0.85
HDAC11Q96DB2 AC083880.1-201ENST00000608266 535 ntBASIC20.38■□□□□ 0.85
HDAC11Q96DB2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.38■□□□□ 0.85
HDAC11Q96DB2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
HDAC11Q96DB2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC11Q96DB2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms