Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTF1Q92541 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.93■■□□□ 1.74
RTF1Q92541 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
RTF1Q92541 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.93■■□□□ 1.74
RTF1Q92541 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.93■■□□□ 1.74
RTF1Q92541 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.93■■□□□ 1.74
RTF1Q92541 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTF1Q92541 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RTF1Q92541 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.92■■□□□ 1.74
RTF1Q92541 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RTF1Q92541 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTF1Q92541 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.92■■□□□ 1.74
RTF1Q92541 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTF1Q92541 TFP1-202ENST00000475455 1573 ntBASIC25.92■■□□□ 1.74
RTF1Q92541 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTF1Q92541 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.92■■□□□ 1.74
RTF1Q92541 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTF1Q92541 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.92■■□□□ 1.74
RTF1Q92541 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.92■■□□□ 1.74
RTF1Q92541 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.92■■□□□ 1.74
RTF1Q92541 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RTF1Q92541 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
RTF1Q92541 PHGDH-210ENST00000641115 1638 ntBASIC25.92■■□□□ 1.74
RTF1Q92541 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.91■■□□□ 1.74
RTF1Q92541 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.91■■□□□ 1.74
RTF1Q92541 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RTF1Q92541 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.91■■□□□ 1.74
RTF1Q92541 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 AC073314.1-201ENST00000568729 2216 ntBASIC25.91■■□□□ 1.74
RTF1Q92541 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.91■■□□□ 1.74
RTF1Q92541 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
RTF1Q92541 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.91■■□□□ 1.74
RTF1Q92541 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.91■■□□□ 1.74
RTF1Q92541 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.91■■□□□ 1.74
RTF1Q92541 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
RTF1Q92541 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.91■■□□□ 1.74
RTF1Q92541 MIR4785-201ENST00000585005 73 ntBASIC25.91■■□□□ 1.74
RTF1Q92541 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
RTF1Q92541 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.91■■□□□ 1.74
RTF1Q92541 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.91■■□□□ 1.74
RTF1Q92541 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RTF1Q92541 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTF1Q92541 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.91■■□□□ 1.74
RTF1Q92541 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.9■■□□□ 1.74
RTF1Q92541 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.9■■□□□ 1.74
RTF1Q92541 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
RTF1Q92541 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.9■■□□□ 1.74
RTF1Q92541 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RTF1Q92541 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.9■■□□□ 1.74
RTF1Q92541 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.9■■□□□ 1.74
RTF1Q92541 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.9■■□□□ 1.74
RTF1Q92541 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.9■■□□□ 1.74
RTF1Q92541 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.9■■□□□ 1.74
RTF1Q92541 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.9■■□□□ 1.74
RTF1Q92541 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.9■■□□□ 1.74
RTF1Q92541 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTF1Q92541 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.89■■□□□ 1.74
RTF1Q92541 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.89■■□□□ 1.74
RTF1Q92541 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
RTF1Q92541 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.89■■□□□ 1.74
RTF1Q92541 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTF1Q92541 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.89■■□□□ 1.74
RTF1Q92541 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
RTF1Q92541 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.73
RTF1Q92541 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
RTF1Q92541 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
RTF1Q92541 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTF1Q92541 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RTF1Q92541 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.89■■□□□ 1.73
RTF1Q92541 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.88■■□□□ 1.73
RTF1Q92541 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.88■■□□□ 1.73
RTF1Q92541 BX119927.1-201ENST00000636596 1552 ntBASIC25.88■■□□□ 1.73
RTF1Q92541 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTF1Q92541 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms