Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 AL391422.3-201ENST00000603791 2761 ntBASIC20.84■□□□□ 0.93
RNF139Q8WU17 PRORSD1P-201ENST00000295112 541 ntBASIC20.84■□□□□ 0.93
RNF139Q8WU17 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF139Q8WU17 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RNF139Q8WU17 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF139Q8WU17 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF139Q8WU17 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
RNF139Q8WU17 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
RNF139Q8WU17 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF139Q8WU17 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF139Q8WU17 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RNF139Q8WU17 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF139Q8WU17 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RNF139Q8WU17 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF139Q8WU17 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF139Q8WU17 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF139Q8WU17 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF139Q8WU17 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF139Q8WU17 AC233263.1-201ENST00000578059 224 ntBASIC20.82■□□□□ 0.92
RNF139Q8WU17 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF139Q8WU17 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF139Q8WU17 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF139Q8WU17 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF139Q8WU17 AC124283.5-201ENST00000624661 1809 ntBASIC20.81■□□□□ 0.92
RNF139Q8WU17 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms