Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 FAM210CP-201ENST00000445714 574 ntBASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHKBP1Q8TBC3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 AL031963.3-201ENST00000606441 850 ntBASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHKBP1Q8TBC3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AP003071.4-201ENST00000562276 1284 ntBASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 CD177P1-201ENST00000606252 935 ntBASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AC133561.5-201ENST00000635547 218 ntBASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.85■□□□□ 0.93
SHKBP1Q8TBC3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 FAM197Y1-201ENST00000421178 764 ntBASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 AL353807.1-201ENST00000427475 662 ntBASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 KRT8P20-201ENST00000423953 1409 ntBASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHKBP1Q8TBC3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.83■□□□□ 0.93
SHKBP1Q8TBC3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHKBP1Q8TBC3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHKBP1Q8TBC3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHKBP1Q8TBC3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHKBP1Q8TBC3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SHKBP1Q8TBC3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms