Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 KRT8P20-201ENST00000423953 1409 ntBASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC2Q8TAQ2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 AC092368.3-202ENST00000574180 1591 ntBASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 POU5F1P3-201ENST00000428824 1078 ntBASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 UNC93B5-201ENST00000530315 699 ntBASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC2Q8TAQ2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 AC009237.14-201ENST00000609975 1594 ntBASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 TREX1-205ENST00000625293 1783 ntBASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC2Q8TAQ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 PNMA6B-201ENST00000538162 1200 ntBASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.22■■□□□ 1.31
SMARCC2Q8TAQ2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 ESRRAP1-201ENST00000400596 1257 ntBASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 AC023632.3-201ENST00000521633 145 ntBASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCC2Q8TAQ2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
SMARCC2Q8TAQ2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC2Q8TAQ2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms