Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 AC007322.1-201ENST00000426983 750 ntBASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 AC008694.1-202ENST00000636953 945 ntBASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLHC1Q8NHS4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLHC1Q8NHS4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLHC1Q8NHS4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.02■□□□□ 0.63
CLHC1Q8NHS4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CLHC1Q8NHS4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 MIR5787-201ENST00000611784 55 ntBASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLHC1Q8NHS4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19■□□□□ 0.63
CLHC1Q8NHS4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 AC093787.1-201ENST00000450396 207 ntBASIC19■□□□□ 0.63
CLHC1Q8NHS4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 AL031963.3-201ENST00000606441 850 ntBASIC19■□□□□ 0.63
CLHC1Q8NHS4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 AC231657.2-201ENST00000624556 255 ntBASIC19■□□□□ 0.63
CLHC1Q8NHS4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLHC1Q8NHS4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLHC1Q8NHS4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 AC004911.1-201ENST00000416316 871 ntBASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 AC120498.9-201ENST00000339021 3867 ntBASIC18.99■□□□□ 0.63
CLHC1Q8NHS4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 AC022517.1-201ENST00000592429 346 ntBASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 KRT17P1-201ENST00000399211 1546 ntBASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 KRT8P20-201ENST00000423953 1409 ntBASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 KRT16P6-202ENST00000425692 1426 ntBASIC18.98■□□□□ 0.63
CLHC1Q8NHS4 AC010980.2-201ENST00000587099 1412 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms