Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 TFP1-202ENST00000475455 1573 ntBASIC23.13■■□□□ 1.29
PNMA1Q8ND90 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PNMA1Q8ND90 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 NBPF21P-201ENST00000425093 1451 ntBASIC23.11■■□□□ 1.29
PNMA1Q8ND90 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PNMA1Q8ND90 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PNMA1Q8ND90 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PNMA1Q8ND90 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PNMA1Q8ND90 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms