Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 TFP1-202ENST00000475455 1573 ntBASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 AP001271.2-201ENST00000624018 1556 ntBASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.65■□□□□ 0.74
TRAM1L1Q8N609 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.74
TRAM1L1Q8N609 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAM1L1Q8N609 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TRAM1L1Q8N609 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAM1L1Q8N609 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAM1L1Q8N609 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 C1QBPP2-201ENST00000528754 825 ntBASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 AL023875.1-201ENST00000640777 796 ntBASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAM1L1Q8N609 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 AC239809.2-201ENST00000415381 517 ntBASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 AC098590.1-201ENST00000468126 897 ntBASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAM1L1Q8N609 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 AC133681.1-201ENST00000465482 601 ntBASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 RPPH1-201ENST00000516869 333 ntBASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRAM1L1Q8N609 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms