Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AC110285.5-201ENST00000611501 352 ntBASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF39Q8N4T4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF39Q8N4T4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 TCF3P1-201ENST00000423021 1937 ntBASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 UBE2SP1-201ENST00000450587 669 ntBASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 PRKY-204ENST00000533551 1019 ntBASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARHGEF39Q8N4T4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 NBPF21P-201ENST00000425093 1451 ntBASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms