Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 AC004980.1-204ENST00000429707 299 ntBASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 KRT16P6-202ENST00000425692 1426 ntBASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ARHGEF28Q8N1W1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ARHGEF28Q8N1W1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 SLC25A3P1-201ENST00000443844 931 ntBASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 SMG8-203ENST00000578922 2178 ntBASIC27.64■■■□□ 2.02
ARHGEF28Q8N1W1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 KRT18P57-201ENST00000443599 1254 ntBASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC27.64■■■□□ 2.01
ARHGEF28Q8N1W1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 TERF1P1-201ENST00000311003 1181 ntBASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 AL445228.2-201ENST00000605589 952 ntBASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ARHGEF28Q8N1W1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 AC092865.7-201ENST00000641832 219 ntBASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC27.62■■■□□ 2.01
ARHGEF28Q8N1W1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC27.61■■■□□ 2.01
ARHGEF28Q8N1W1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ARHGEF28Q8N1W1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms