Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PHGDH-210ENST00000641115 1638 ntBASIC22.04■■□□□ 1.12
CCDC65Q8IXS2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC65Q8IXS2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC65Q8IXS2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC65Q8IXS2 AC092368.3-202ENST00000574180 1591 ntBASIC22.04■■□□□ 1.12
CCDC65Q8IXS2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 AC060766.5-201ENST00000590539 871 ntBASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 AP001271.2-201ENST00000624018 1556 ntBASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC65Q8IXS2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.02■■□□□ 1.12
CCDC65Q8IXS2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC65Q8IXS2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC65Q8IXS2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC65Q8IXS2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 AC006557.6-201ENST00000623071 864 ntBASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC65Q8IXS2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22■■□□□ 1.11
CCDC65Q8IXS2 HES2-206ENST00000489730 730 ntTSL 2 BASIC22■■□□□ 1.11
CCDC65Q8IXS2 PNMA6B-201ENST00000538162 1200 ntBASIC22■■□□□ 1.11
CCDC65Q8IXS2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22■■□□□ 1.11
CCDC65Q8IXS2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22■■□□□ 1.11
CCDC65Q8IXS2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22■■□□□ 1.11
CCDC65Q8IXS2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC65Q8IXS2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC65Q8IXS2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC65Q8IXS2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms