Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
APLFQ8IW19 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 AC079598.2-202ENST00000546624 1451 ntBASIC19.6■□□□□ 0.73
APLFQ8IW19 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.6■□□□□ 0.73
APLFQ8IW19 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APLFQ8IW19 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.59■□□□□ 0.73
APLFQ8IW19 AC006128.1-201ENST00000624704 1661 ntBASIC19.59■□□□□ 0.73
APLFQ8IW19 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 PRORSD1P-201ENST00000295112 541 ntBASIC19.59■□□□□ 0.73
APLFQ8IW19 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.59■□□□□ 0.73
APLFQ8IW19 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.59■□□□□ 0.73
APLFQ8IW19 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.59■□□□□ 0.73
APLFQ8IW19 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 MYC-209ENST00000641252 345 ntBASIC19.59■□□□□ 0.73
APLFQ8IW19 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
APLFQ8IW19 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APLFQ8IW19 KRT16P2-201ENST00000414673 1423 ntBASIC19.59■□□□□ 0.73
APLFQ8IW19 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
APLFQ8IW19 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APLFQ8IW19 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APLFQ8IW19 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.58■□□□□ 0.73
APLFQ8IW19 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
APLFQ8IW19 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APLFQ8IW19 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
APLFQ8IW19 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
APLFQ8IW19 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 AC097658.1-201ENST00000475555 843 ntBASIC19.58■□□□□ 0.72
APLFQ8IW19 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.58■□□□□ 0.72
APLFQ8IW19 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
APLFQ8IW19 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.58■□□□□ 0.72
APLFQ8IW19 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.58■□□□□ 0.72
APLFQ8IW19 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
APLFQ8IW19 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.58■□□□□ 0.72
APLFQ8IW19 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.58■□□□□ 0.72
APLFQ8IW19 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
APLFQ8IW19 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APLFQ8IW19 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.57■□□□□ 0.72
APLFQ8IW19 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
APLFQ8IW19 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
APLFQ8IW19 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.57■□□□□ 0.72
APLFQ8IW19 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
APLFQ8IW19 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 AL591742.1-201ENST00000604433 565 ntBASIC19.57■□□□□ 0.72
APLFQ8IW19 AC083880.1-201ENST00000608266 535 ntBASIC19.57■□□□□ 0.72
APLFQ8IW19 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.57■□□□□ 0.72
APLFQ8IW19 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.57■□□□□ 0.72
APLFQ8IW19 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
APLFQ8IW19 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APLFQ8IW19 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.56■□□□□ 0.72
APLFQ8IW19 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
APLFQ8IW19 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.56■□□□□ 0.72
APLFQ8IW19 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.56■□□□□ 0.72
APLFQ8IW19 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
APLFQ8IW19 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 AC243732.1-201ENST00000612648 864 ntBASIC19.56■□□□□ 0.72
APLFQ8IW19 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.56■□□□□ 0.72
APLFQ8IW19 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
APLFQ8IW19 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.56■□□□□ 0.72
APLFQ8IW19 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms