Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.39■□□□□ 0.86
CDKL3Q8IVW4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL3Q8IVW4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.39■□□□□ 0.86
CDKL3Q8IVW4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 BX276092.2-201ENST00000417668 665 ntBASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL3Q8IVW4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 PHGDH-210ENST00000641115 1638 ntBASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 GPX1P1-201ENST00000388829 606 ntBASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 TREX1-205ENST00000625293 1783 ntBASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL3Q8IVW4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 CROCCP5-201ENST00000436658 830 ntBASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL3Q8IVW4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 AC007952.6-201ENST00000573168 2673 ntBASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 AC003957.1-201ENST00000625108 2673 ntBASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL3Q8IVW4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL3Q8IVW4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms