Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.42■□□□□ 0.38
LYSMD2Q8IV50 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 SYT6-210ENST00000641643 1587 ntBASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
LYSMD2Q8IV50 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 KRT16P3-201ENST00000439127 1283 ntBASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 MIR3621-201ENST00000580529 85 ntBASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
LYSMD2Q8IV50 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LYSMD2Q8IV50 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 SERBP1P1-201ENST00000396021 1160 ntBASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 AL138724.1-201ENST00000606771 1088 ntBASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 BX119927.1-201ENST00000636596 1552 ntBASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD2Q8IV50 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 PRORSD1P-202ENST00000563365 2154 ntBASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 RARRES2P1-201ENST00000474487 481 ntBASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD2Q8IV50 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms