Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 AL691432.2-201ENST00000607222 2038 ntBASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD3Q7Z3D4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 RPS2P52-201ENST00000469610 820 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 AC026366.1-201ENST00000488803 879 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 AC120498.8-201ENST00000614275 531 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 TCF3P1-201ENST00000423021 1937 ntBASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD3Q7Z3D4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD3Q7Z3D4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD3Q7Z3D4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms