Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.07□□□□□ -0.32
SCXQ7RTU7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 GCSHP5-201ENST00000443090 522 ntBASIC13.07□□□□□ -0.32
SCXQ7RTU7 AL158047.1-201ENST00000445918 881 ntBASIC13.07□□□□□ -0.32
SCXQ7RTU7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 PKD1P1-201ENST00000458669 6805 ntBASIC13.06□□□□□ -0.32
SCXQ7RTU7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 KRT18P68-201ENST00000392293 1000 ntBASIC13.06□□□□□ -0.32
SCXQ7RTU7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 AC060766.5-201ENST00000590539 871 ntBASIC13.06□□□□□ -0.32
SCXQ7RTU7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 HLA-B-256ENST00000639848 1089 ntBASIC13.06□□□□□ -0.32
SCXQ7RTU7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SCXQ7RTU7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SCXQ7RTU7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 AC073648.6-201ENST00000641589 218 ntBASIC13.05□□□□□ -0.32
SCXQ7RTU7 AP006294.2-201ENST00000641667 209 ntBASIC13.05□□□□□ -0.32
SCXQ7RTU7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SCXQ7RTU7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SCXQ7RTU7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 CYP21A1P-202ENST00000354927 1481 ntBASIC13.04□□□□□ -0.32
SCXQ7RTU7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms