Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 MIR935-201ENST00000401179 91 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 AL512625.2-201ENST00000417533 625 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 AL355472.2-201ENST00000422958 438 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 AL137784.2-201ENST00000607332 1000 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 AC080038.1-201ENST00000611274 1154 ntBASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST3H2AQ7L7L0 KRT16P6-202ENST00000425692 1426 ntBASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 AC010980.2-201ENST00000587099 1412 ntBASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 AC004911.1-201ENST00000416316 871 ntBASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST3H2AQ7L7L0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 HLA-G-202ENST00000376815 851 ntBASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 HLA-G-203ENST00000376818 1127 ntBASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 KRT8P20-201ENST00000423953 1409 ntBASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST3H2AQ7L7L0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
HIST3H2AQ7L7L0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms