Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 AC003102.1-202ENST00000563394 1796 ntBASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 KRT18P6-201ENST00000555540 1265 ntBASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 OR7E47P-201ENST00000546390 1422 ntBASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXR1Q6PIV2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 MYCNOS-205ENST00000641950 531 ntBASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXR1Q6PIV2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 AC142086.2-201ENST00000569753 217 ntBASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXR1Q6PIV2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXR1Q6PIV2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXR1Q6PIV2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
FOXR1Q6PIV2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.58■□□□□ 0.88
FOXR1Q6PIV2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXR1Q6PIV2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXR1Q6PIV2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXR1Q6PIV2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms