Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RNF213Q63HN8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.68□□□□□ -0.7
RNF213Q63HN8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC10.68□□□□□ -0.7
RNF213Q63HN8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.68□□□□□ -0.7
RNF213Q63HN8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.68□□□□□ -0.7
RNF213Q63HN8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RNF213Q63HN8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.68□□□□□ -0.7
RNF213Q63HN8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RNF213Q63HN8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.67□□□□□ -0.7
RNF213Q63HN8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 AC011498.5-201ENST00000592027 486 ntBASIC10.67□□□□□ -0.7
RNF213Q63HN8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 AC142381.3-201ENST00000568208 1670 ntBASIC10.67□□□□□ -0.7
RNF213Q63HN8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.67□□□□□ -0.7
RNF213Q63HN8 AC096733.2-201ENST00000609937 1394 ntBASIC10.67□□□□□ -0.7
RNF213Q63HN8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC10.67□□□□□ -0.7
RNF213Q63HN8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RNF213Q63HN8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC245100.3-201ENST00000441281 285 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC012615.1-201ENST00000565797 1299 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AL121912.1-201ENST00000603683 238 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC064862.7-201ENST00000604520 867 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 GPX1P2-201ENST00000429271 606 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC004980.1-204ENST00000429707 299 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 PGAM5P1-201ENST00000518923 814 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC092364.2-202ENST00000597012 1073 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RNF213Q63HN8 AC134684.3-201ENST00000641758 218 ntBASIC10.66□□□□□ -0.7
RNF213Q63HN8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RNF213Q63HN8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RNF213Q63HN8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 HES2-202ENST00000377836 507 ntTSL 2 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 HLA-V-201ENST00000429037 534 ntBASIC10.65□□□□□ -0.7
RNF213Q63HN8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
RNF213Q63HN8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
RNF213Q63HN8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms