Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 ZNRF2P3-201ENST00000424200 374 ntBASIC19.04■□□□□ 0.64
RNF220Q5VTB9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 KRT18P14-201ENST00000534205 1250 ntBASIC19.04■□□□□ 0.64
RNF220Q5VTB9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 RARRES2P11-201ENST00000635158 484 ntBASIC19.04■□□□□ 0.64
RNF220Q5VTB9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF220Q5VTB9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 AP001160.3-201ENST00000601484 763 ntBASIC19.03■□□□□ 0.64
RNF220Q5VTB9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 AC093484.2-201ENST00000580996 2166 ntBASIC19.03■□□□□ 0.64
RNF220Q5VTB9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF220Q5VTB9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 KRT18P20-201ENST00000548986 1279 ntBASIC19.02■□□□□ 0.64
RNF220Q5VTB9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF220Q5VTB9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF220Q5VTB9 AC012313.1-201ENST00000593393 3059 ntBASIC19.02■□□□□ 0.63
RNF220Q5VTB9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF220Q5VTB9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms