Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
CDC42BPAQ5VT25 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 AC006128.1-201ENST00000624704 1661 ntBASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CDC42BPAQ5VT25 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 AC097488.1-201ENST00000507834 756 ntBASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 FAM87A-204ENST00000613235 858 ntBASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC30.24■■■□□ 2.43
CDC42BPAQ5VT25 BID-203ENST00000399765 1879 ntTSL 2 BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 FP700111.2-201ENST00000619190 1892 ntBASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPAQ5VT25 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 HLA-A-209ENST00000638375 975 ntBASIC30.22■■■□□ 2.43
CDC42BPAQ5VT25 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 TUBB8P6-201ENST00000436895 1288 ntBASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDC42BPAQ5VT25 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
CDC42BPAQ5VT25 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC30.2■■■□□ 2.43
CDC42BPAQ5VT25 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.2■■■□□ 2.43
CDC42BPAQ5VT25 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDC42BPAQ5VT25 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDC42BPAQ5VT25 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.2■■■□□ 2.42
CDC42BPAQ5VT25 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CDC42BPAQ5VT25 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.2■■■□□ 2.42
CDC42BPAQ5VT25 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 WWC2-AS2-201ENST00000578387 2183 ntBASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 AC063952.2-201ENST00000498792 1227 ntBASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 EGLN1P1-201ENST00000531623 762 ntBASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
CDC42BPAQ5VT25 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 AC128688.1-201ENST00000487626 519 ntBASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC30.18■■■□□ 2.42
CDC42BPAQ5VT25 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 PTPA-216ENST00000432651 857 ntTSL 2 BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDC42BPAQ5VT25 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms