Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 AC005363.2-201ENST00000618631 242 ntBASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 AC026310.3-201ENST00000625186 2373 ntBASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 AC073508.3-201ENST00000619697 1419 ntBASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC18Q5T9S5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CCDC18Q5T9S5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.82■■■□□ 2.53
CCDC18Q5T9S5 TUBB8P6-201ENST00000436895 1288 ntBASIC30.82■■■□□ 2.53
CCDC18Q5T9S5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC30.82■■■□□ 2.53
CCDC18Q5T9S5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC18Q5T9S5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC18Q5T9S5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC18Q5T9S5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC18Q5T9S5 KRT18P57-201ENST00000443599 1254 ntBASIC30.82■■■□□ 2.52
CCDC18Q5T9S5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.81■■■□□ 2.52
CCDC18Q5T9S5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 KRT18P35-201ENST00000510488 1269 ntBASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC18Q5T9S5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 KRT18P22-201ENST00000402024 1347 ntBASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC18Q5T9S5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 C2orf69P3-201ENST00000565542 1120 ntBASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
CCDC18Q5T9S5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 BX119927.1-201ENST00000636596 1552 ntBASIC30.77■■■□□ 2.52
CCDC18Q5T9S5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 HLA-A-209ENST00000638375 975 ntBASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.76■■■□□ 2.52
CCDC18Q5T9S5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC30.76■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms