Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 AC010327.4-202ENST00000591484 748 ntBASIC10.96□□□□□ -0.65
UBR4Q5T4S7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 AC079089.2-201ENST00000531211 1277 ntBASIC10.96□□□□□ -0.65
UBR4Q5T4S7 AL023973.1-201ENST00000624619 620 ntBASIC10.96□□□□□ -0.65
UBR4Q5T4S7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBR4Q5T4S7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.96□□□□□ -0.66
UBR4Q5T4S7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 AP001005.1-201ENST00000571755 1248 ntBASIC10.95□□□□□ -0.66
UBR4Q5T4S7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 NFE2L3P1-201ENST00000588207 1959 ntBASIC10.95□□□□□ -0.66
UBR4Q5T4S7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 C11orf96-202ENST00000528572 1834 ntBASIC10.95□□□□□ -0.66
UBR4Q5T4S7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 UPF3AP3-201ENST00000420996 769 ntBASIC10.95□□□□□ -0.66
UBR4Q5T4S7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBR4Q5T4S7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms