Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 NCF1B-203ENST00000435988 1254 ntBASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP13A4Q4VNC1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP13A4Q4VNC1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 TSPY6P-201ENST00000448518 926 ntBASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP13A4Q4VNC1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.64■□□□□ 0.9
ATP13A4Q4VNC1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP13A4Q4VNC1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP13A4Q4VNC1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP13A4Q4VNC1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 AC093484.2-201ENST00000580996 2166 ntBASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP13A4Q4VNC1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms